Reconstruction of α-helices in a Protein Molecule


KIPS Transactions on Software and Data Engineering, Vol. 3, No. 4, pp. 163-168, Apr. 2014
10.3745/KTSDE.2014.3.4.163,   PDF Download:

Abstract

In a protein molecule, α-helices are important for protein structure, function, and binding to other proteins, so the analysis on the structure of helices has been researched. Since an interaction between two helices is evaluated based on their axes, massive errors in protein structure analysis would be caused if a curved or kinked long α-helix is considered as a linear one. In this paper, we present an algorithm to reconstruct α-helices in a protein molecule as a sequence of straight helices under given threshold.


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Cite this article
[IEEE Style]
K. J. Kim, B. S. Kang, U. D. Seo, "Reconstruction of α-helices in a Protein Molecule," KIPS Transactions on Software and Data Engineering, vol. 3, no. 4, pp. 163-168, 2014. DOI: 10.3745/KTSDE.2014.3.4.163.

[ACM Style]
Ku Jin Kim, Beom Sik Kang, and U Deok Seo. 2014. Reconstruction of α-helices in a Protein Molecule. KIPS Transactions on Software and Data Engineering, 3, 4, (2014), 163-168. DOI: 10.3745/KTSDE.2014.3.4.163.