Three Dimensional Visualization of Contact Region for a Protein Complex


KIPS Transactions on Software and Data Engineering, Vol. 2, No. 12, pp. 899-902, Dec. 2013
10.3745/KTSDE.2013.2.12.899, Full Text:

Abstract

In this paper, we present a method to visualize the contact region between two molecules in a protein complex in a threedimensional space. The contact region of two molecules shows compatibility in geometric aspects. Usually, the computation of the area of contact region has been used to show the strength of compatibility. The numerical value and simple drawing of contact region would be useful for comparing the relative strength of different contacts, but it is not appropriate for analysing the geometric characteristics of the contact region. In this paper, we present a method to show the compatibility between two molecules by visualizing the distance information between them.


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Cite this article
[IEEE Style]
B. S. Kang, K. J. Kim and Y. K. Kim, "Three Dimensional Visualization of Contact Region for a Protein Complex," KIPS Transactions on Software and Data Engineering, vol. 2, no. 12, pp. 899-902, 2013. DOI: 10.3745/KTSDE.2013.2.12.899.

[ACM Style]
Beom Sik Kang, Ku Jin Kim, and Yu Kyeong Kim. 2013. Three Dimensional Visualization of Contact Region for a Protein Complex. KIPS Transactions on Software and Data Engineering, 2, 12, (2013), 899-902. DOI: 10.3745/KTSDE.2013.2.12.899.